Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 AC005332.1-201ENST00000577698 1310 ntBASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 AL691432.3-201ENST00000621860 400 ntBASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 AL133373.2-201ENST00000623187 2828 ntBASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 FP475955.4-201ENST00000623131 1990 ntBASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.39■□□□□ 0.86
RPGRIP1Q96KN7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AC096733.2-201ENST00000609937 1394 ntBASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AC069148.1-201ENST00000608741 768 ntBASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AL512353.2-201ENST00000448759 1962 ntBASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPGRIP1Q96KN7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 TFP1-202ENST00000475455 1573 ntBASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 AC116351.2-201ENST00000606540 1585 ntBASIC20.38■□□□□ 0.85
RPGRIP1Q96KN7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms