Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 MIR3687-1-201ENST00000614492 61 ntBASIC21.61■■□□□ 1.05
CDCA5Q96FF9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA5Q96FF9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 AC040169.1-201ENST00000565382 521 ntBASIC21.59■■□□□ 1.05
CDCA5Q96FF9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 AL138831.2-201ENST00000606564 490 ntBASIC21.59■■□□□ 1.05
CDCA5Q96FF9 AC134684.3-201ENST00000641758 218 ntBASIC21.59■■□□□ 1.05
CDCA5Q96FF9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 FP475955.4-201ENST00000623131 1990 ntBASIC21.59■■□□□ 1.05
CDCA5Q96FF9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA5Q96FF9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 DNAJB3-201ENST00000446806 729 ntBASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC011467.2-201ENST00000598425 242 ntBASIC21.58■■□□□ 1.05
CDCA5Q96FF9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC025062.2-201ENST00000605477 670 ntBASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC083906.6-201ENST00000641366 219 ntBASIC21.58■■□□□ 1.05
CDCA5Q96FF9 AC079781.4-201ENST00000641908 219 ntBASIC21.58■■□□□ 1.05
CDCA5Q96FF9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.58■■□□□ 1.05
CDCA5Q96FF9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDCA5Q96FF9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CDCA5Q96FF9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 ABCD1P5-201ENST00000445663 754 ntBASIC21.57■■□□□ 1.04
CDCA5Q96FF9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA5Q96FF9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA5Q96FF9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA5Q96FF9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.56■■□□□ 1.04
CDCA5Q96FF9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.56■■□□□ 1.04
CDCA5Q96FF9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.56■■□□□ 1.04
CDCA5Q96FF9 AL137060.1-201ENST00000618151 2648 ntBASIC21.56■■□□□ 1.04
CDCA5Q96FF9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms