Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN23Q96B33 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN23Q96B33 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN23Q96B33 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN23Q96B33 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN23Q96B33 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN23Q96B33 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN23Q96B33 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 RPS2P1-201ENST00000434010 821 ntBASIC18.43■□□□□ 0.54
CLDN23Q96B33 ABCD1P5-201ENST00000445663 754 ntBASIC18.43■□□□□ 0.54
CLDN23Q96B33 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 Z83851.2-201ENST00000609564 659 ntBASIC18.43■□□□□ 0.54
CLDN23Q96B33 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN23Q96B33 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN23Q96B33 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 YBX2P1-201ENST00000394192 760 ntBASIC18.42■□□□□ 0.54
CLDN23Q96B33 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 KRT18P3-201ENST00000451602 1288 ntBASIC18.42■□□□□ 0.54
CLDN23Q96B33 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 AC112482.1-201ENST00000492080 688 ntBASIC18.42■□□□□ 0.54
CLDN23Q96B33 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 LINC02084-201ENST00000606069 1096 ntBASIC18.42■□□□□ 0.54
CLDN23Q96B33 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN23Q96B33 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN23Q96B33 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 DNAJB3-201ENST00000446806 729 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 RNA5SP415-201ENST00000517246 115 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 OR7E14P-202ENST00000530490 1290 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 AC012640.2-201ENST00000561606 901 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 AC040169.1-201ENST00000565382 521 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 AC027796.2-201ENST00000575326 344 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 MIR3687-2-201ENST00000577708 61 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 MIR3687-1-201ENST00000614492 61 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN23Q96B33 AC083906.6-201ENST00000641366 219 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 AC079781.4-201ENST00000641908 219 ntBASIC18.41■□□□□ 0.54
CLDN23Q96B33 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN23Q96B33 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms