Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCAMP4Q969E2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 HBZP1-201ENST00000354915 429 ntBASIC18.36■□□□□ 0.53
SCAMP4Q969E2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 AC126763.1-201ENST00000552015 2118 ntBASIC18.36■□□□□ 0.53
SCAMP4Q969E2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 MIR3180-4-201ENST00000582223 153 ntBASIC18.36■□□□□ 0.53
SCAMP4Q969E2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAMP4Q969E2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 SPDYE13P-201ENST00000445314 798 ntBASIC18.35■□□□□ 0.53
SCAMP4Q969E2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAMP4Q969E2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 AL391807.1-203ENST00000604392 2365 ntBASIC18.34■□□□□ 0.53
SCAMP4Q969E2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 ZNF444P1-201ENST00000559497 298 ntBASIC18.34■□□□□ 0.53
SCAMP4Q969E2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 AL136038.4-201ENST00000603606 1261 ntBASIC18.34■□□□□ 0.53
SCAMP4Q969E2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAMP4Q969E2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCAMP4Q969E2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms