Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 IRX1P1-201ENST00000438849 1838 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 AC011840.4-201ENST00000578471 627 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 AF228730.7-201ENST00000641842 219 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 AC007952.6-201ENST00000573168 2673 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 AC003957.1-201ENST00000625108 2673 ntBASIC18.36■□□□□ 0.53
TMEFF1Q8IYR6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 AP001005.1-201ENST00000571755 1248 ntBASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 AC064862.7-201ENST00000604520 867 ntBASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 TP73-AS1-207ENST00000624167 988 ntBASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEFF1Q8IYR6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms