Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 KRT8P3-201ENST00000519669 1449 ntBASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 POM121L13P-201ENST00000422362 380 ntBASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 UNC93B4-201ENST00000505679 747 ntBASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUDCD3Q8IVD9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 AC008556.1-201ENST00000610908 2040 ntBASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 NCF1B-203ENST00000435988 1254 ntBASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 KRT8P11-201ENST00000409686 1436 ntBASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.4■□□□□ 0.54
NUDCD3Q8IVD9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NUDCD3Q8IVD9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NUDCD3Q8IVD9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NUDCD3Q8IVD9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 Z85996.1-201ENST00000494644 937 ntBASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
NUDCD3Q8IVD9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 AC139713.2-201ENST00000641328 2723 ntBASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUDCD3Q8IVD9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms