Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS1Q6VY07 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS1Q6VY07 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.73■□□□□ 0.59
PACS1Q6VY07 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PACS1Q6VY07 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS1Q6VY07 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PACS1Q6VY07 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS1Q6VY07 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PACS1Q6VY07 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 CRYGFP-201ENST00000418459 633 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 AL596275.1-201ENST00000423464 877 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 CA15P1-201ENST00000481698 905 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 FITM1-202ENST00000559294 800 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 MYC-208ENST00000641036 567 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 PCDHB18P-201ENST00000524813 2368 ntBASIC18.72■□□□□ 0.59
PACS1Q6VY07 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PACS1Q6VY07 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.72■□□□□ 0.59
PACS1Q6VY07 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 AP000525.1-201ENST00000608286 694 ntBASIC18.71■□□□□ 0.59
PACS1Q6VY07 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 KRT8P45-201ENST00000414328 1447 ntBASIC18.71■□□□□ 0.59
PACS1Q6VY07 AC112777.1-201ENST00000540175 1423 ntBASIC18.71■□□□□ 0.59
PACS1Q6VY07 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PACS1Q6VY07 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PACS1Q6VY07 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.71■□□□□ 0.58
PACS1Q6VY07 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.7■□□□□ 0.58
PACS1Q6VY07 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PACS1Q6VY07 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PACS1Q6VY07 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.69■□□□□ 0.58
PACS1Q6VY07 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms