Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC4Q6S5L8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 AL353719.1-201ENST00000566847 864 ntBASIC20.89■□□□□ 0.93
SHC4Q6S5L8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 AC020763.4-201ENST00000623414 4170 ntBASIC20.89■□□□□ 0.93
SHC4Q6S5L8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC4Q6S5L8 SDHAP2-201ENST00000455183 2001 ntBASIC20.88■□□□□ 0.93
SHC4Q6S5L8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 UNC93B2-201ENST00000285383 730 ntBASIC20.88■□□□□ 0.93
SHC4Q6S5L8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC4Q6S5L8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 AC092338.2-201ENST00000568827 1415 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 SLC25A1P2-201ENST00000430693 912 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 FITM1-202ENST00000559294 800 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 CR769767.2-201ENST00000622735 460 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TMEM191A-211ENST00000637163 1067 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 AC138028.4-201ENST00000564984 1845 ntBASIC20.87■□□□□ 0.93
SHC4Q6S5L8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC4Q6S5L8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHC4Q6S5L8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms