Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST2H2AA3Q6FI13 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST2H2AA3Q6FI13 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 AC126763.1-201ENST00000552015 2118 ntBASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 AC092338.2-201ENST00000568827 1415 ntBASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 TSPY14P-201ENST00000303979 915 ntBASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 KRT18P41-201ENST00000518924 1277 ntBASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 AL499627.1-201ENST00000569373 2188 ntBASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST2H2AA3Q6FI13 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIST2H2AA3Q6FI13 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIST2H2AA3Q6FI13 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIST2H2AA3Q6FI13 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.46
HIST2H2AA3Q6FI13 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 MYLKP1-201ENST00000509077 1580 ntBASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 AL596275.1-201ENST00000423464 877 ntBASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 AC007663.1-201ENST00000438948 1240 ntBASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST2H2AA3Q6FI13 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms