Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 FAM220CP-201ENST00000395253 831 ntBASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 AC068472.1-201ENST00000474589 881 ntBASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AL139424.1-201ENST00000607572 797 ntBASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC113404.2-201ENST00000507884 177 ntBASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 AC068587.9-201ENST00000641814 219 ntBASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VPS13DQ5THJ4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 RNA5SP415-201ENST00000517246 115 ntBASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 AC104109.2-201ENST00000602919 1418 ntBASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 RCN1P2-201ENST00000398357 915 ntBASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 RPS2P1-201ENST00000434010 821 ntBASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 AF186996.4-201ENST00000467186 377 ntBASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13DQ5THJ4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms