Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCS1Q01581 AL162741.1-201ENST00000565563 1558 ntBASIC17.87■□□□□ 0.45
HMGCS1Q01581 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS1Q01581 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 AC012618.2-201ENST00000428058 849 ntBASIC17.86■□□□□ 0.45
HMGCS1Q01581 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.86■□□□□ 0.45
HMGCS1Q01581 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMGCS1Q01581 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HMGCS1Q01581 HTR7P1-202ENST00000624664 4411 ntBASIC17.86■□□□□ 0.45
HMGCS1Q01581 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 MYLKP1-201ENST00000509077 1580 ntBASIC17.86■□□□□ 0.45
HMGCS1Q01581 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCS1Q01581 AC099343.3-201ENST00000605834 2503 ntBASIC17.86■□□□□ 0.45
HMGCS1Q01581 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 AC068880.1-201ENST00000507289 2297 ntBASIC17.85■□□□□ 0.45
HMGCS1Q01581 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCS1Q01581 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCS1Q01581 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AC090340.1-201ENST00000620778 4980 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 CRYGFP-201ENST00000418459 633 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 MCCD1P1-208ENST00000445732 328 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 Z99916.2-201ENST00000604037 246 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 AP001412.1-201ENST00000608405 714 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 NOC2LP2-201ENST00000407594 1944 ntBASIC17.84■□□□□ 0.45
HMGCS1Q01581 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HMGCS1Q01581 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS1Q01581 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HMGCS1Q01581 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms