Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLDN20P56880 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
CLDN20P56880 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CLDN20P56880 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN20P56880 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 TMPOP1-202ENST00000424642 1267 ntBASIC16.97■□□□□ 0.31
CLDN20P56880 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN20P56880 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN20P56880 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN20P56880 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 KRT8P45-201ENST00000414328 1447 ntBASIC16.96■□□□□ 0.31
CLDN20P56880 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN20P56880 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN20P56880 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN20P56880 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLDN20P56880 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN20P56880 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLDN20P56880 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN20P56880 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN20P56880 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN20P56880 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN20P56880 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN20P56880 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLDN20P56880 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.96■□□□□ 0.31
CLDN20P56880 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN20P56880 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN20P56880 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN20P56880 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CLDN20P56880 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.96■□□□□ 0.3
CLDN20P56880 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN20P56880 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN20P56880 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN20P56880 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN20P56880 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN20P56880 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN20P56880 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.95■□□□□ 0.3
CLDN20P56880 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 AL023284.2-201ENST00000405850 579 ntBASIC16.95■□□□□ 0.3
CLDN20P56880 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN20P56880 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLDN20P56880 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN20P56880 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN20P56880 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN20P56880 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN20P56880 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLDN20P56880 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN20P56880 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN20P56880 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms