Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.07■■□□□ 1.12
NEK4P51957 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK4P51957 AL023284.2-201ENST00000405850 579 ntBASIC22.07■■□□□ 1.12
NEK4P51957 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.07■■□□□ 1.12
NEK4P51957 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 KRT18P41-201ENST00000518924 1277 ntBASIC22.07■■□□□ 1.12
NEK4P51957 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.07■■□□□ 1.12
NEK4P51957 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.07■■□□□ 1.12
NEK4P51957 AC096733.2-201ENST00000609937 1394 ntBASIC22.07■■□□□ 1.12
NEK4P51957 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
NEK4P51957 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 GPAT2P1-201ENST00000444924 1672 ntBASIC22.07■■□□□ 1.12
NEK4P51957 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NEK4P51957 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.07■■□□□ 1.12
NEK4P51957 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NEK4P51957 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK4P51957 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 AL135905.2-201ENST00000584934 1404 ntBASIC22.06■■□□□ 1.12
NEK4P51957 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK4P51957 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK4P51957 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
NEK4P51957 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 PRORSD1P-201ENST00000295112 541 ntBASIC22.06■■□□□ 1.12
NEK4P51957 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.06■■□□□ 1.12
NEK4P51957 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.06■■□□□ 1.12
NEK4P51957 SLC25A1P4-201ENST00000567977 778 ntBASIC22.06■■□□□ 1.12
NEK4P51957 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
NEK4P51957 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK4P51957 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.06■■□□□ 1.12
NEK4P51957 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK4P51957 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK4P51957 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK4P51957 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.05■■□□□ 1.12
NEK4P51957 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
NEK4P51957 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
NEK4P51957 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.05■■□□□ 1.12
NEK4P51957 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
NEK4P51957 MIR564-202ENST00000385049 94 ntBASIC22.05■■□□□ 1.12
NEK4P51957 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.05■■□□□ 1.12
NEK4P51957 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 AC116562.2-201ENST00000507042 360 ntBASIC22.05■■□□□ 1.12
NEK4P51957 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.05■■□□□ 1.12
NEK4P51957 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
NEK4P51957 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEK4P51957 AC099343.3-201ENST00000605834 2503 ntBASIC22.05■■□□□ 1.12
NEK4P51957 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
NEK4P51957 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
NEK4P51957 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.04■■□□□ 1.12
NEK4P51957 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NEK4P51957 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NEK4P51957 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NEK4P51957 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.04■■□□□ 1.12
NEK4P51957 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 MFAP1P1-201ENST00000442257 1255 ntBASIC22.04■■□□□ 1.12
NEK4P51957 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK4P51957 AC142381.4-202ENST00000563973 229 ntBASIC22.04■■□□□ 1.12
NEK4P51957 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.04■■□□□ 1.12
NEK4P51957 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK4P51957 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK4P51957 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK4P51957 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEK4P51957 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms