Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.3■□□□□ 0.2
CX3CR1P49238 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.3■□□□□ 0.2
CX3CR1P49238 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CX3CR1P49238 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CX3CR1P49238 LTB4R2-202ENST00000528054 3092 ntBASIC16.3■□□□□ 0.2
CX3CR1P49238 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.29■□□□□ 0.2
CX3CR1P49238 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CX3CR1P49238 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 AC096733.2-201ENST00000609937 1394 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 PKD1P1-201ENST00000458669 6805 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 ABHD17AP1-201ENST00000358206 933 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 AC012618.2-201ENST00000428058 849 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.29■□□□□ 0.2
CX3CR1P49238 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 AC116562.2-201ENST00000507042 360 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 AC113410.3-201ENST00000623366 203 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.29■□□□□ 0.2
CX3CR1P49238 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CX3CR1P49238 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 AL354751.1-201ENST00000412768 1863 ntBASIC16.29■□□□□ 0.2
CX3CR1P49238 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CR1P49238 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 KRT8P45-201ENST00000414328 1447 ntBASIC16.28■□□□□ 0.2
CX3CR1P49238 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.28■□□□□ 0.2
CX3CR1P49238 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.28■□□□□ 0.2
CX3CR1P49238 AC233702.5-201ENST00000584107 538 ntBASIC16.28■□□□□ 0.2
CX3CR1P49238 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 AL049637.2-201ENST00000641778 930 ntBASIC16.28■□□□□ 0.2
CX3CR1P49238 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CX3CR1P49238 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CR1P49238 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CX3CR1P49238 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CR1P49238 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CX3CR1P49238 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CR1P49238 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.27■□□□□ 0.2
CX3CR1P49238 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CR1P49238 PCDHB18P-201ENST00000524813 2368 ntBASIC16.27■□□□□ 0.2
CX3CR1P49238 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms