Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MTHFRP42898 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MTHFRP42898 AC011840.4-201ENST00000578471 627 ntBASIC19.35■□□□□ 0.69
MTHFRP42898 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MTHFRP42898 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.35■□□□□ 0.69
MTHFRP42898 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.35■□□□□ 0.69
MTHFRP42898 AC099778.1-201ENST00000568593 1911 ntBASIC19.35■□□□□ 0.69
MTHFRP42898 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.34■□□□□ 0.69
MTHFRP42898 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.34■□□□□ 0.69
MTHFRP42898 FAM197Y8-203ENST00000450145 560 ntBASIC19.34■□□□□ 0.69
MTHFRP42898 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.34■□□□□ 0.69
MTHFRP42898 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.34■□□□□ 0.69
MTHFRP42898 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MTHFRP42898 TP73-AS1-207ENST00000624167 988 ntBASIC19.34■□□□□ 0.69
MTHFRP42898 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MTHFRP42898 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MTHFRP42898 AL353692.3-201ENST00000407031 1396 ntBASIC19.33■□□□□ 0.69
MTHFRP42898 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.33■□□□□ 0.69
MTHFRP42898 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
MTHFRP42898 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.33■□□□□ 0.69
MTHFRP42898 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MTHFRP42898 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
MTHFRP42898 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.33■□□□□ 0.68
MTHFRP42898 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 RNA5SP419-201ENST00000515908 135 ntBASIC19.33■□□□□ 0.68
MTHFRP42898 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.33■□□□□ 0.68
MTHFRP42898 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.33■□□□□ 0.68
MTHFRP42898 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 KRT89P-201ENST00000620027 1478 ntBASIC19.33■□□□□ 0.68
MTHFRP42898 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
MTHFRP42898 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
MTHFRP42898 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MTHFRP42898 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MTHFRP42898 Z82202.1-201ENST00000623446 1880 ntBASIC19.33■□□□□ 0.68
MTHFRP42898 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MTHFRP42898 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.32■□□□□ 0.68
MTHFRP42898 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.32■□□□□ 0.68
MTHFRP42898 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 AC093909.1-201ENST00000504731 1122 ntBASIC19.32■□□□□ 0.68
MTHFRP42898 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.32■□□□□ 0.68
MTHFRP42898 KRT18P58-201ENST00000527480 1120 ntBASIC19.32■□□□□ 0.68
MTHFRP42898 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.32■□□□□ 0.68
MTHFRP42898 AP005901.3-202ENST00000581653 237 ntBASIC19.32■□□□□ 0.68
MTHFRP42898 AC087289.5-201ENST00000586076 3175 ntBASIC19.32■□□□□ 0.68
MTHFRP42898 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.32■□□□□ 0.68
MTHFRP42898 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 AC006333.2-201ENST00000607957 2099 ntBASIC19.32■□□□□ 0.68
MTHFRP42898 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MTHFRP42898 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.32■□□□□ 0.68
MTHFRP42898 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MTHFRP42898 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MTHFRP42898 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 TCF3P1-201ENST00000423021 1937 ntBASIC19.31■□□□□ 0.68
MTHFRP42898 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MTHFRP42898 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.31■□□□□ 0.68
MTHFRP42898 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MTHFRP42898 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms