Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HNF4AP41235 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HNF4AP41235 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.97■□□□□ 0.47
HNF4AP41235 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.97■□□□□ 0.47
HNF4AP41235 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.97■□□□□ 0.47
HNF4AP41235 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HNF4AP41235 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.96■□□□□ 0.47
HNF4AP41235 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HNF4AP41235 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HNF4AP41235 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 INGX-201ENST00000359239 846 ntBASIC17.96■□□□□ 0.47
HNF4AP41235 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HNF4AP41235 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.96■□□□□ 0.47
HNF4AP41235 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HNF4AP41235 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.96■□□□□ 0.47
HNF4AP41235 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HNF4AP41235 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HNF4AP41235 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.96■□□□□ 0.46
HNF4AP41235 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
HNF4AP41235 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HNF4AP41235 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
HNF4AP41235 AP000593.1-201ENST00000393668 712 ntBASIC17.95■□□□□ 0.46
HNF4AP41235 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.95■□□□□ 0.46
HNF4AP41235 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.95■□□□□ 0.46
HNF4AP41235 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 TSPY17P-201ENST00000450329 467 ntBASIC17.95■□□□□ 0.46
HNF4AP41235 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.95■□□□□ 0.46
HNF4AP41235 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.95■□□□□ 0.46
HNF4AP41235 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.95■□□□□ 0.46
HNF4AP41235 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
HNF4AP41235 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HNF4AP41235 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.94■□□□□ 0.46
HNF4AP41235 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HNF4AP41235 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
HNF4AP41235 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 CCR12P-201ENST00000446203 998 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.94■□□□□ 0.46
HNF4AP41235 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.94■□□□□ 0.46
HNF4AP41235 MIR3180-5-201ENST00000583743 153 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.94■□□□□ 0.46
HNF4AP41235 AL023803.3-201ENST00000615559 522 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 AC073912.3-201ENST00000624414 853 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 AC133561.5-201ENST00000635547 218 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 AC116562.4-202ENST00000641738 218 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HNF4AP41235 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HNF4AP41235 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
HNF4AP41235 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.94■□□□□ 0.46
HNF4AP41235 AC034236.2-201ENST00000606662 1610 ntBASIC17.94■□□□□ 0.46
HNF4AP41235 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
HNF4AP41235 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
HNF4AP41235 LINC01568-207ENST00000641790 1380 ntBASIC17.93■□□□□ 0.46
HNF4AP41235 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HNF4AP41235 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms