Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.94■□□□□ 0.14
CCL1P22362 AL163051.1-201ENST00000569214 1512 ntBASIC15.94■□□□□ 0.14
CCL1P22362 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.94■□□□□ 0.14
CCL1P22362 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.94■□□□□ 0.14
CCL1P22362 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 AC026471.5-201ENST00000615068 467 ntBASIC15.94■□□□□ 0.14
CCL1P22362 AL023803.3-201ENST00000615559 522 ntBASIC15.94■□□□□ 0.14
CCL1P22362 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 AC067852.2-201ENST00000590513 2313 ntBASIC15.94■□□□□ 0.14
CCL1P22362 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.93■□□□□ 0.14
CCL1P22362 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.93■□□□□ 0.14
CCL1P22362 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 MIR149-201ENST00000384879 89 ntBASIC15.93■□□□□ 0.14
CCL1P22362 SLC25A1P2-201ENST00000430693 912 ntBASIC15.93■□□□□ 0.14
CCL1P22362 AL355355.2-201ENST00000442321 338 ntBASIC15.93■□□□□ 0.14
CCL1P22362 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.93■□□□□ 0.14
CCL1P22362 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.93■□□□□ 0.14
CCL1P22362 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 SDHAP2-201ENST00000455183 2001 ntBASIC15.93■□□□□ 0.14
CCL1P22362 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.93■□□□□ 0.14
CCL1P22362 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCL1P22362 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.93■□□□□ 0.14
CCL1P22362 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.93■□□□□ 0.14
CCL1P22362 AL096828.2-201ENST00000567259 1965 ntBASIC15.93■□□□□ 0.14
CCL1P22362 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 PHGDH-209ENST00000641074 1780 ntBASIC15.92■□□□□ 0.14
CCL1P22362 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 AIRN-201ENST00000601203 4374 ntBASIC15.92■□□□□ 0.14
CCL1P22362 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 AC009102.3-201ENST00000623118 1491 ntBASIC15.92■□□□□ 0.14
CCL1P22362 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCL1P22362 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.92■□□□□ 0.14
CCL1P22362 AL158047.1-201ENST00000445918 881 ntBASIC15.92■□□□□ 0.14
CCL1P22362 WWOX-216ENST00000569818 525 ntBASIC15.92■□□□□ 0.14
CCL1P22362 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.92■□□□□ 0.14
CCL1P22362 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
CCL1P22362 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 GNAS-203ENST00000306120 1878 ntBASIC15.92■□□□□ 0.14
CCL1P22362 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCL1P22362 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL1P22362 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL1P22362 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCL1P22362 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms