Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.27■□□□□ 0.52
BCKDHBP21953 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.27■□□□□ 0.52
BCKDHBP21953 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.27■□□□□ 0.52
BCKDHBP21953 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 AC132008.2-207ENST00000454517 770 ntBASIC18.27■□□□□ 0.52
BCKDHBP21953 AC092865.5-201ENST00000545435 363 ntBASIC18.27■□□□□ 0.52
BCKDHBP21953 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.27■□□□□ 0.52
BCKDHBP21953 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.27■□□□□ 0.52
BCKDHBP21953 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.27■□□□□ 0.52
BCKDHBP21953 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BCKDHBP21953 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCKDHBP21953 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCKDHBP21953 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BCKDHBP21953 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
BCKDHBP21953 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.26■□□□□ 0.51
BCKDHBP21953 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BCKDHBP21953 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
BCKDHBP21953 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
BCKDHBP21953 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BCKDHBP21953 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.26■□□□□ 0.51
BCKDHBP21953 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.26■□□□□ 0.51
BCKDHBP21953 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.26■□□□□ 0.51
BCKDHBP21953 MIR7706-201ENST00000613747 67 ntBASIC18.26■□□□□ 0.51
BCKDHBP21953 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.26■□□□□ 0.51
BCKDHBP21953 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BCKDHBP21953 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BCKDHBP21953 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 SLC25A24-204ENST00000569674 2357 ntBASIC18.26■□□□□ 0.51
BCKDHBP21953 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BCKDHBP21953 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCKDHBP21953 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
BCKDHBP21953 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 AC018712.1-201ENST00000455767 687 ntBASIC18.25■□□□□ 0.51
BCKDHBP21953 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 AC106730.1-201ENST00000566722 1090 ntBASIC18.25■□□□□ 0.51
BCKDHBP21953 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.25■□□□□ 0.51
BCKDHBP21953 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.25■□□□□ 0.51
BCKDHBP21953 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BCKDHBP21953 AC141586.3-201ENST00000562166 1838 ntBASIC18.25■□□□□ 0.51
BCKDHBP21953 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCKDHBP21953 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 AC073130.3-201ENST00000624389 2278 ntBASIC18.24■□□□□ 0.51
BCKDHBP21953 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.24■□□□□ 0.51
BCKDHBP21953 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BCKDHBP21953 MIR940-201ENST00000401276 94 ntBASIC18.24■□□□□ 0.51
BCKDHBP21953 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
BCKDHBP21953 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.24■□□□□ 0.51
BCKDHBP21953 RNPS1P1-201ENST00000507437 918 ntBASIC18.24■□□□□ 0.51
BCKDHBP21953 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.24■□□□□ 0.51
BCKDHBP21953 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BCKDHBP21953 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.24■□□□□ 0.51
BCKDHBP21953 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCKDHBP21953 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCKDHBP21953 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.23■□□□□ 0.51
BCKDHBP21953 RCN1P2-201ENST00000398357 915 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms