Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.6■■□□□ 1.21
COL11A2P13942 AL139424.1-201ENST00000607572 797 ntBASIC22.6■■□□□ 1.21
COL11A2P13942 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
COL11A2P13942 AL163051.1-201ENST00000569214 1512 ntBASIC22.6■■□□□ 1.21
COL11A2P13942 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 AP005117.1-201ENST00000584346 1413 ntBASIC22.6■■□□□ 1.21
COL11A2P13942 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.6■■□□□ 1.21
COL11A2P13942 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.6■■□□□ 1.21
COL11A2P13942 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.6■■□□□ 1.21
COL11A2P13942 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.6■■□□□ 1.21
COL11A2P13942 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.6■■□□□ 1.21
COL11A2P13942 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.59■■□□□ 1.21
COL11A2P13942 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.59■■□□□ 1.21
COL11A2P13942 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.59■■□□□ 1.21
COL11A2P13942 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.59■■□□□ 1.21
COL11A2P13942 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.59■■□□□ 1.21
COL11A2P13942 AC092910.1-201ENST00000482027 1129 ntBASIC22.59■■□□□ 1.21
COL11A2P13942 OR7E14P-202ENST00000530490 1290 ntBASIC22.59■■□□□ 1.21
COL11A2P13942 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 AL355385.1-201ENST00000606123 409 ntBASIC22.59■■□□□ 1.21
COL11A2P13942 AC008735.5-201ENST00000623544 497 ntBASIC22.59■■□□□ 1.21
COL11A2P13942 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.59■■□□□ 1.21
COL11A2P13942 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL11A2P13942 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.58■■□□□ 1.21
COL11A2P13942 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.58■■□□□ 1.21
COL11A2P13942 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
COL11A2P13942 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 AC007967.2-201ENST00000432613 625 ntBASIC22.58■■□□□ 1.21
COL11A2P13942 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.58■■□□□ 1.21
COL11A2P13942 AC027601.4-201ENST00000611259 610 ntBASIC22.58■■□□□ 1.21
COL11A2P13942 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.58■■□□□ 1.21
COL11A2P13942 AL139288.1-201ENST00000623748 933 ntBASIC22.58■■□□□ 1.21
COL11A2P13942 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL11A2P13942 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL11A2P13942 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.58■■□□□ 1.2
COL11A2P13942 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
COL11A2P13942 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.2
COL11A2P13942 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL11A2P13942 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.58■■□□□ 1.2
COL11A2P13942 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.58■■□□□ 1.2
COL11A2P13942 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 AL591424.1-201ENST00000442569 1213 ntBASIC22.57■■□□□ 1.2
COL11A2P13942 RNA5SP415-201ENST00000517246 115 ntBASIC22.57■■□□□ 1.2
COL11A2P13942 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.57■■□□□ 1.2
COL11A2P13942 AP001160.2-201ENST00000596071 487 ntBASIC22.57■■□□□ 1.2
COL11A2P13942 AC011467.2-201ENST00000598425 242 ntBASIC22.57■■□□□ 1.2
COL11A2P13942 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.57■■□□□ 1.2
COL11A2P13942 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.57■■□□□ 1.2
COL11A2P13942 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
COL11A2P13942 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.57■■□□□ 1.2
COL11A2P13942 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL11A2P13942 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.57■■□□□ 1.2
COL11A2P13942 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.57■■□□□ 1.2
COL11A2P13942 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL11A2P13942 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL11A2P13942 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.56■■□□□ 1.2
COL11A2P13942 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL11A2P13942 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.56■■□□□ 1.2
COL11A2P13942 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.56■■□□□ 1.2
COL11A2P13942 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL11A2P13942 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms