Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.07■□□□□ 0.96
TPM2P07951 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM2P07951 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TPM2P07951 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM2P07951 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM2P07951 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM2P07951 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM2P07951 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TPM2P07951 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TPM2P07951 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 AL138781.1-201ENST00000566567 1274 ntBASIC21.06■□□□□ 0.96
TPM2P07951 SOX15-203ENST00000570788 1093 ntBASIC21.06■□□□□ 0.96
TPM2P07951 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.06■□□□□ 0.96
TPM2P07951 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.06■□□□□ 0.96
TPM2P07951 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 AC134043.2-201ENST00000624206 2238 ntBASIC21.06■□□□□ 0.96
TPM2P07951 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM2P07951 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TPM2P07951 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.05■□□□□ 0.96
TPM2P07951 LINC01126-201ENST00000623515 1646 ntBASIC21.05■□□□□ 0.96
TPM2P07951 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM2P07951 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TPM2P07951 MIR935-201ENST00000401179 91 ntBASIC21.05■□□□□ 0.96
TPM2P07951 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.05■□□□□ 0.96
TPM2P07951 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TPM2P07951 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM2P07951 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.05■□□□□ 0.96
TPM2P07951 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TPM2P07951 AC008687.6-201ENST00000596318 630 ntBASIC21.05■□□□□ 0.96
TPM2P07951 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM2P07951 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TPM2P07951 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.04■□□□□ 0.96
TPM2P07951 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM2P07951 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TPM2P07951 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TPM2P07951 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM2P07951 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TPM2P07951 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM2P07951 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM2P07951 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TPM2P07951 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TPM2P07951 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM2P07951 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM2P07951 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms