Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.54■□□□□ 0.72
RB1P06400 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.54■□□□□ 0.72
RB1P06400 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.54■□□□□ 0.72
RB1P06400 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.54■□□□□ 0.72
RB1P06400 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
RB1P06400 MTDHP3-201ENST00000594186 672 ntBASIC19.54■□□□□ 0.72
RB1P06400 AL049840.3-201ENST00000602669 611 ntBASIC19.54■□□□□ 0.72
RB1P06400 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.54■□□□□ 0.72
RB1P06400 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.54■□□□□ 0.72
RB1P06400 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RB1P06400 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 TP73-AS1-210ENST00000637775 1455 ntBASIC19.54■□□□□ 0.72
RB1P06400 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 AL157384.1-201ENST00000445995 2473 ntBASIC19.53■□□□□ 0.72
RB1P06400 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RB1P06400 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.53■□□□□ 0.72
RB1P06400 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.53■□□□□ 0.72
RB1P06400 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.53■□□□□ 0.72
RB1P06400 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.53■□□□□ 0.72
RB1P06400 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.53■□□□□ 0.72
RB1P06400 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.53■□□□□ 0.72
RB1P06400 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.53■□□□□ 0.72
RB1P06400 AC116407.3-201ENST00000623905 1129 ntBASIC19.53■□□□□ 0.72
RB1P06400 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RB1P06400 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.53■□□□□ 0.72
RB1P06400 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RB1P06400 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.53■□□□□ 0.72
RB1P06400 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 AC112777.1-201ENST00000540175 1423 ntBASIC19.52■□□□□ 0.72
RB1P06400 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.52■□□□□ 0.72
RB1P06400 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 MIR940-201ENST00000401276 94 ntBASIC19.52■□□□□ 0.72
RB1P06400 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RB1P06400 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.52■□□□□ 0.72
RB1P06400 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.52■□□□□ 0.72
RB1P06400 AC009533.2-201ENST00000543664 586 ntBASIC19.52■□□□□ 0.72
RB1P06400 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.52■□□□□ 0.72
RB1P06400 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
RB1P06400 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 AL357033.4-201ENST00000617703 1807 ntBASIC19.52■□□□□ 0.72
RB1P06400 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RB1P06400 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RB1P06400 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RB1P06400 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RB1P06400 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RB1P06400 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
RB1P06400 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.51■□□□□ 0.71
RB1P06400 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RB1P06400 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RB1P06400 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.51■□□□□ 0.71
RB1P06400 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.51■□□□□ 0.71
RB1P06400 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RB1P06400 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.51■□□□□ 0.71
RB1P06400 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RB1P06400 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms