Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
CD74P04233 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.57■□□□□ 0.08
CD74P04233 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.57■□□□□ 0.08
CD74P04233 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CD74P04233 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 C1QL1P1-201ENST00000568105 661 ntBASIC15.57■□□□□ 0.08
CD74P04233 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 AC087623.3-201ENST00000607047 1098 ntBASIC15.57■□□□□ 0.08
CD74P04233 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.57■□□□□ 0.08
CD74P04233 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 AC092368.3-202ENST00000574180 1591 ntBASIC15.57■□□□□ 0.08
CD74P04233 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD74P04233 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.56■□□□□ 0.08
CD74P04233 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 HTR7P1-201ENST00000538670 1336 ntBASIC15.56■□□□□ 0.08
CD74P04233 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CD74P04233 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.56■□□□□ 0.08
CD74P04233 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CD74P04233 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.56■□□□□ 0.08
CD74P04233 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD74P04233 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
CD74P04233 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CD74P04233 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 AC091874.3-201ENST00000512672 1195 ntBASIC15.55■□□□□ 0.08
CD74P04233 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.55■□□□□ 0.08
CD74P04233 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 MIR5787-201ENST00000611784 55 ntBASIC15.55■□□□□ 0.08
CD74P04233 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 HLA-B-256ENST00000639848 1089 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms