Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.44■□□□□ 0.86
CD4P01730 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.44■□□□□ 0.86
CD4P01730 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.44■□□□□ 0.86
CD4P01730 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.44■□□□□ 0.86
CD4P01730 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.44■□□□□ 0.86
CD4P01730 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 AC141586.3-201ENST00000562166 1838 ntBASIC20.43■□□□□ 0.86
CD4P01730 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.43■□□□□ 0.86
CD4P01730 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CD4P01730 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 VENTXP7-201ENST00000475503 772 ntBASIC20.43■□□□□ 0.86
CD4P01730 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.43■□□□□ 0.86
CD4P01730 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.43■□□□□ 0.86
CD4P01730 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.43■□□□□ 0.86
CD4P01730 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.43■□□□□ 0.86
CD4P01730 AL353692.3-201ENST00000407031 1396 ntBASIC20.43■□□□□ 0.86
CD4P01730 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.43■□□□□ 0.86
CD4P01730 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD4P01730 KRT89P-201ENST00000620027 1478 ntBASIC20.43■□□□□ 0.86
CD4P01730 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CD4P01730 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 AC093484.2-201ENST00000580996 2166 ntBASIC20.42■□□□□ 0.86
CD4P01730 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CD4P01730 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.42■□□□□ 0.86
CD4P01730 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.42■□□□□ 0.86
CD4P01730 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.42■□□□□ 0.86
CD4P01730 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.42■□□□□ 0.86
CD4P01730 AL773604.1-201ENST00000617417 272 ntBASIC20.42■□□□□ 0.86
CD4P01730 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.42■□□□□ 0.86
CD4P01730 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CD4P01730 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CD4P01730 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.42■□□□□ 0.86
CD4P01730 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CD4P01730 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD4P01730 FEM1AP3-201ENST00000403722 1741 ntBASIC20.41■□□□□ 0.86
CD4P01730 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.41■□□□□ 0.86
CD4P01730 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.41■□□□□ 0.86
CD4P01730 SLC25A24-204ENST00000569674 2357 ntBASIC20.41■□□□□ 0.86
CD4P01730 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CD4P01730 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.41■□□□□ 0.86
CD4P01730 POM121L3P-201ENST00000419331 1163 ntBASIC20.41■□□□□ 0.86
CD4P01730 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.41■□□□□ 0.86
CD4P01730 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.41■□□□□ 0.86
CD4P01730 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 SLC25A1P1-201ENST00000528351 927 ntBASIC20.41■□□□□ 0.86
CD4P01730 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.41■□□□□ 0.86
CD4P01730 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.41■□□□□ 0.86
CD4P01730 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.41■□□□□ 0.86
CD4P01730 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.41■□□□□ 0.86
CD4P01730 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.41■□□□□ 0.86
CD4P01730 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD4P01730 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
CD4P01730 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CD4P01730 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 FAM197Y8-203ENST00000450145 560 ntBASIC20.4■□□□□ 0.86
CD4P01730 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.4■□□□□ 0.86
CD4P01730 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms