Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.19■□□□□ 0.66
IFNB1P01574 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFNB1P01574 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.19■□□□□ 0.66
IFNB1P01574 MIR6786-201ENST00000616843 113 ntBASIC19.19■□□□□ 0.66
IFNB1P01574 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
IFNB1P01574 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
IFNB1P01574 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
IFNB1P01574 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
IFNB1P01574 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.19■□□□□ 0.66
IFNB1P01574 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFNB1P01574 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.19■□□□□ 0.66
IFNB1P01574 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 FAM201B-201ENST00000458407 597 ntBASIC19.18■□□□□ 0.66
IFNB1P01574 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.18■□□□□ 0.66
IFNB1P01574 AL359736.2-201ENST00000621992 437 ntBASIC19.18■□□□□ 0.66
IFNB1P01574 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
IFNB1P01574 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.18■□□□□ 0.66
IFNB1P01574 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.18■□□□□ 0.66
IFNB1P01574 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNB1P01574 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.17■□□□□ 0.66
IFNB1P01574 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
IFNB1P01574 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
IFNB1P01574 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
IFNB1P01574 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.17■□□□□ 0.66
IFNB1P01574 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.17■□□□□ 0.66
IFNB1P01574 AL162741.1-201ENST00000565563 1558 ntBASIC19.17■□□□□ 0.66
IFNB1P01574 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IFNB1P01574 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
IFNB1P01574 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IFNB1P01574 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNB1P01574 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC135776.1-201ENST00000319817 2481 ntBASIC19.16■□□□□ 0.66
IFNB1P01574 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC068880.1-201ENST00000507289 2297 ntBASIC19.16■□□□□ 0.66
IFNB1P01574 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
IFNB1P01574 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.16■□□□□ 0.66
IFNB1P01574 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
IFNB1P01574 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.16■□□□□ 0.66
IFNB1P01574 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.16■□□□□ 0.66
IFNB1P01574 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms