Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTNND1O60716 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 AKR1C7P-201ENST00000305623 895 ntBASIC21.6■■□□□ 1.05
CTNND1O60716 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CTNND1O60716 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.6■■□□□ 1.05
CTNND1O60716 AL022342.1-201ENST00000400363 863 ntBASIC21.6■■□□□ 1.05
CTNND1O60716 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CTNND1O60716 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTNND1O60716 AL032819.2-201ENST00000624543 2162 ntBASIC21.6■■□□□ 1.05
CTNND1O60716 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CTNND1O60716 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CTNND1O60716 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CTNND1O60716 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 MRPL3P1-201ENST00000400109 1033 ntBASIC21.59■■□□□ 1.05
CTNND1O60716 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 SAPCD2P3-201ENST00000455031 850 ntBASIC21.59■■□□□ 1.05
CTNND1O60716 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CTNND1O60716 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CTNND1O60716 REXO1L6P-202ENST00000619970 1078 ntBASIC21.59■■□□□ 1.05
CTNND1O60716 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CTNND1O60716 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
CTNND1O60716 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTNND1O60716 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CTNND1O60716 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CTNND1O60716 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 POM121L3P-201ENST00000419331 1163 ntBASIC21.58■■□□□ 1.05
CTNND1O60716 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.58■■□□□ 1.05
CTNND1O60716 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.58■■□□□ 1.05
CTNND1O60716 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.58■■□□□ 1.05
CTNND1O60716 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTNND1O60716 AC004263.2-201ENST00000617183 678 ntBASIC21.58■■□□□ 1.05
CTNND1O60716 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTNND1O60716 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.58■■□□□ 1.04
CTNND1O60716 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTNND1O60716 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTNND1O60716 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTNND1O60716 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.58■■□□□ 1.04
CTNND1O60716 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CTNND1O60716 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 NUS1P2-201ENST00000417358 873 ntBASIC21.57■■□□□ 1.04
CTNND1O60716 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 MINOS1P3-201ENST00000457048 203 ntBASIC21.57■■□□□ 1.04
CTNND1O60716 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CTNND1O60716 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CTNND1O60716 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTNND1O60716 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CTNND1O60716 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CTNND1O60716 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CTNND1O60716 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CTNND1O60716 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTNND1O60716 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CTNND1O60716 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.56■■□□□ 1.04
CTNND1O60716 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.56■■□□□ 1.04
CTNND1O60716 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.56■■□□□ 1.04
CTNND1O60716 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.56■■□□□ 1.04
CTNND1O60716 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms