Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX4O60224 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX4O60224 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX4O60224 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX4O60224 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX4O60224 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 KRT8P20-201ENST00000423953 1409 ntBASIC16.8■□□□□ 0.28
SSX4O60224 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSX4O60224 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 AL353708.3-201ENST00000610272 989 ntBASIC16.8■□□□□ 0.28
SSX4O60224 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX4O60224 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX4O60224 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX4O60224 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SSX4O60224 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SSX4O60224 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SSX4O60224 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.79■□□□□ 0.28
SSX4O60224 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX4O60224 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX4O60224 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SSX4O60224 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.78■□□□□ 0.28
SSX4O60224 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
SSX4O60224 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 RCN1P1-201ENST00000400413 996 ntBASIC16.78■□□□□ 0.28
SSX4O60224 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.78■□□□□ 0.28
SSX4O60224 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.78■□□□□ 0.28
SSX4O60224 AC012306.2-201ENST00000609350 630 ntBASIC16.78■□□□□ 0.28
SSX4O60224 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SSX4O60224 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SSX4O60224 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.78■□□□□ 0.28
SSX4O60224 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms