Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 AC087289.5-201ENST00000586076 3175 ntBASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA3F8WFD2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 AC069148.1-201ENST00000608741 768 ntBASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA3F8WFD2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 AC092597.1-201ENST00000487352 616 ntBASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA3F8WFD2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms