Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 AC027307.3-201ENST00000594262 1100 ntBASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 AC008761.3-201ENST00000624803 892 ntBASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 AL513210.1-201ENST00000629608 234 ntBASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85CA6NKD9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AC073621.1-201ENST00000392730 636 ntBASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 BX005266.1-201ENST00000473402 457 ntBASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AC067863.1-201ENST00000494933 530 ntBASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 AC092902.6-201ENST00000641783 218 ntBASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85CA6NKD9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 ARSEP1-201ENST00000420443 635 ntBASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 VN2R19P-201ENST00000442399 1052 ntBASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 AC244015.2-201ENST00000616358 1861 ntBASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC85CA6NKD9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 UGT1A2P-201ENST00000454886 866 ntBASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 AL138831.2-201ENST00000606564 490 ntBASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85CA6NKD9 Z98882.1-201ENST00000622160 2253 ntBASIC20.39■□□□□ 0.86
CCDC85CA6NKD9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms