Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 CA15P1-201ENST00000481698 905 ntBASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 LETM1P2-201ENST00000597330 2178 ntBASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 KRT8P50-201ENST00000562022 1438 ntBASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 AP005242.2-201ENST00000580065 1175 ntBASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 AP000525.1-201ENST00000608286 694 ntBASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM49BA6NDI0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 TMEM191A-211ENST00000637163 1067 ntBASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM49BA6NDI0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 MIR3180-5-201ENST00000583743 153 ntBASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 AC034236.2-201ENST00000606662 1610 ntBASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM49BA6NDI0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM49BA6NDI0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 UNC93B2-201ENST00000285383 730 ntBASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 SNORA78-201ENST00000459373 127 ntBASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 AP003041.3-201ENST00000527151 707 ntBASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 AL023803.3-201ENST00000615559 522 ntBASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 REXO1L9P-201ENST00000604264 2108 ntBASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms