Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CKBP1-201ENST00000565489 1086 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LINC01238-205ENST00000567549 1107 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL512604.3-201ENST00000569583 964 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC087388.1-201ENST00000571370 1112 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ANO7L1-203ENST00000602586 1720 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KRT8P41-201ENST00000533985 1514 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CA15P1-201ENST00000481698 905 ntBASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL353719.1-201ENST00000566847 864 ntBASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NTF6B-201ENST00000591913 560 ntBASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 BICD1-207ENST00000551848 1962 ntBASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV4S1A1TA0A5B7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC092338.2-201ENST00000568827 1415 ntBASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms