Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 AL031008.1-201ENST00000619963 541 ntBASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 KRT8P7-201ENST00000533003 1432 ntBASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SNX11Q9Y5W9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 AC012615.1-201ENST00000565797 1299 ntBASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 AC005332.3-201ENST00000589904 676 ntBASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 TEX21P-204ENST00000641479 1693 ntBASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX11Q9Y5W9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 HOXB1-202ENST00000577092 1414 ntBASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 AP003733.1-201ENST00000491725 852 ntBASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms