Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR5100-201ENST00000579544 119 ntBASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 AL671883.3-201ENST00000603274 991 ntBASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 AL591684.3-201ENST00000605187 298 ntBASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 AL773604.1-201ENST00000617417 272 ntBASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 AC114341.1-201ENST00000618070 349 ntBASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC28.59■■■□□ 2.17
CDK11AQ9UQ88 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.58■■■□□ 2.17
CDK11AQ9UQ88 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 FAM197Y8-203ENST00000450145 560 ntBASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.57■■■□□ 2.16
CDK11AQ9UQ88 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 PMS2P1-201ENST00000431037 1228 ntBASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 NME4-212ENST00000621774 904 ntTSL 3 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 AC117500.6-201ENST00000624871 588 ntBASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
CDK11AQ9UQ88 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 KRT18P67-201ENST00000432816 1264 ntBASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.55■■■□□ 2.16
CDK11AQ9UQ88 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms