Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC3Q9NUV7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 AP001094.4-201ENST00000579008 2176 ntBASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SPTLC3Q9NUV7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC3Q9NUV7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 REXO1L9P-201ENST00000604264 2108 ntBASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SPTLC3Q9NUV7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 FLJ13224-201ENST00000313737 1514 ntBASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC3Q9NUV7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms