Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 KRT8P8-201ENST00000434750 1448 ntBASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 TNRC18P3-201ENST00000441896 2691 ntBASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 AC098590.1-201ENST00000468126 897 ntBASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 KRT18P16-201ENST00000510337 1294 ntBASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 AC073592.3-201ENST00000625118 1834 ntBASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCF3Q9NUQ8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 TMEM191A-211ENST00000637163 1067 ntBASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCF3Q9NUQ8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ABCF3Q9NUQ8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms