Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GCSHP2-201ENST00000560971 527 ntBASIC19.77■□□□□ 0.76
CISHQ9NSE2 RN7SL850P-201ENST00000579959 291 ntBASIC19.77■□□□□ 0.76
CISHQ9NSE2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CISHQ9NSE2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CISHQ9NSE2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.77■□□□□ 0.75
CISHQ9NSE2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CISHQ9NSE2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AL163051.1-201ENST00000569214 1512 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AC099343.3-201ENST00000605834 2503 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AC117947.1-201ENST00000427448 529 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AC140113.3-201ENST00000605663 199 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 AC006011.2-201ENST00000621313 1158 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 AL031432.5-201ENST00000641059 760 ntBASIC19.76■□□□□ 0.75
CISHQ9NSE2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
CISHQ9NSE2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CISHQ9NSE2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 AC090164.3-201ENST00000610780 2143 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 YBX1P2-201ENST00000489612 999 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 AL441883.1-201ENST00000566170 1045 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 AC010240.3-201ENST00000607688 395 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 AC011558.1-201ENST00000623459 338 ntBASIC19.75■□□□□ 0.75
CISHQ9NSE2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CISHQ9NSE2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CISHQ9NSE2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.74■□□□□ 0.75
CISHQ9NSE2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CISHQ9NSE2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms