Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AC130371.2-201ENST00000619443 611 ntBASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 AL354751.1-201ENST00000412768 1863 ntBASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS2Q9NRF8 PKD1P1-201ENST00000458669 6805 ntBASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTPS2Q9NRF8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.27■□□□□ 0.35
CTPS2Q9NRF8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTPS2Q9NRF8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTPS2Q9NRF8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.27■□□□□ 0.35
CTPS2Q9NRF8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CTPS2Q9NRF8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AL355355.2-201ENST00000442321 338 ntBASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 FAM207BP-201ENST00000447172 505 ntBASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AC026471.5-201ENST00000615068 467 ntBASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTPS2Q9NRF8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 TSPY7P-201ENST00000431358 1114 ntBASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 PRSS44-201ENST00000515154 1146 ntBASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms