Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 IRX1P1-201ENST00000438849 1838 ntBASIC19.16■□□□□ 0.66
HPS4Q9NQG7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 KRT18P1-202ENST00000452408 1331 ntBASIC19.16■□□□□ 0.66
HPS4Q9NQG7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.16■□□□□ 0.66
HPS4Q9NQG7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 TPSP2-201ENST00000561760 610 ntBASIC19.15■□□□□ 0.66
HPS4Q9NQG7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS4Q9NQG7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
HPS4Q9NQG7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HPS4Q9NQG7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HPS4Q9NQG7 AL158211.5-201ENST00000623583 2518 ntBASIC19.14■□□□□ 0.65
HPS4Q9NQG7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AL845331.1-201ENST00000424978 1190 ntBASIC19.14■□□□□ 0.65
HPS4Q9NQG7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 AC111152.3-201ENST00000569699 673 ntBASIC19.14■□□□□ 0.65
HPS4Q9NQG7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HPS4Q9NQG7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms