Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRIM2Q9C040 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM2Q9C040 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM2Q9C040 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM2Q9C040 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM2Q9C040 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM2Q9C040 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 AC211429.1-201ENST00000415277 523 ntBASIC17.08■□□□□ 0.32
TRIM2Q9C040 MFAP1P1-201ENST00000442257 1255 ntBASIC17.08■□□□□ 0.32
TRIM2Q9C040 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM2Q9C040 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM2Q9C040 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 ECEL1P3-201ENST00000427961 737 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 AL355355.2-201ENST00000442321 338 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 AC097488.1-201ENST00000507834 756 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 AL355075.4-201ENST00000554988 638 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 AC026471.5-201ENST00000615068 467 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM2Q9C040 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 PKD1P1-201ENST00000458669 6805 ntBASIC17.07■□□□□ 0.32
TRIM2Q9C040 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM2Q9C040 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms