Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 AC036111.1-201ENST00000533973 1582 ntBASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 AL109659.2-201ENST00000606809 1674 ntBASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.49■■□□□ 1.19
RPAP1Q9BWH6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.48■■□□□ 1.19
RPAP1Q9BWH6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 MCCD1P1-208ENST00000445732 328 ntBASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPAP1Q9BWH6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms