Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 RBM17P3-201ENST00000417687 1192 ntBASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 AL355877.3-201ENST00000622820 899 ntBASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 AC008687.5-201ENST00000593746 558 ntBASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN4Q96NY8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 MIR7706-201ENST00000613747 67 ntBASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.15■□□□□ 0.66
NECTIN4Q96NY8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NECTIN4Q96NY8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
NECTIN4Q96NY8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
NECTIN4Q96NY8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NECTIN4Q96NY8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 MIR940-201ENST00000401276 94 ntBASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 FAM215A-202ENST00000632077 792 ntBASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN4Q96NY8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN4Q96NY8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN4Q96NY8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN4Q96NY8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms