Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AL163051.1-201ENST00000569214 1512 ntBASIC19.68■□□□□ 0.74
ZNF558Q96NG5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 KRT18P41-201ENST00000518924 1277 ntBASIC19.68■□□□□ 0.74
ZNF558Q96NG5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.67■□□□□ 0.74
ZNF558Q96NG5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.67■□□□□ 0.74
ZNF558Q96NG5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF558Q96NG5 MTMR9LP-203ENST00000426597 1545 ntBASIC19.66■□□□□ 0.74
ZNF558Q96NG5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 POM121L3P-201ENST00000419331 1163 ntBASIC19.66■□□□□ 0.74
ZNF558Q96NG5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF558Q96NG5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 HLA-A-201ENST00000376802 1334 ntBASIC19.65■□□□□ 0.74
ZNF558Q96NG5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF558Q96NG5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF558Q96NG5 AL032819.2-201ENST00000624543 2162 ntBASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms