Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 AC010947.1-201ENST00000623454 693 ntBASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 MIR149-201ENST00000384879 89 ntBASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM5Q96HC4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 ESPNP-201ENST00000270691 2015 ntBASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 KRT8P9-201ENST00000558927 1449 ntBASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 AC104390.1-201ENST00000555663 520 ntBASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 NAPSB-206ENST00000562112 1266 ntBASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 SDHAP2-201ENST00000455183 2001 ntBASIC18.1■□□□□ 0.49
PDLIM5Q96HC4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 GMCL1P1-201ENST00000463439 1581 ntBASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 AC009102.3-201ENST00000623118 1491 ntBASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 INGX-201ENST00000359239 846 ntBASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms