Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AC016734.2-201ENST00000624325 1377 ntBASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AP000593.1-201ENST00000393668 712 ntBASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 HLA-F-220ENST00000434407 884 ntBASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AL162741.1-201ENST00000565563 1558 ntBASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AL691432.3-201ENST00000621860 400 ntBASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0A1Q93050 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 AC026396.1-201ENST00000419388 421 ntBASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 AC009065.1-201ENST00000564055 1225 ntBASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 MIR3652-201ENST00000579335 131 ntBASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 AL136038.4-201ENST00000603606 1261 ntBASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 AL391807.1-203ENST00000604392 2365 ntBASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP6V0A1Q93050 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 AC120498.9-201ENST00000339021 3867 ntBASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0A1Q93050 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 KRT8P50-201ENST00000562022 1438 ntBASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP6V0A1Q93050 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms