Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SHROOM3Q8TF72 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 AC141257.4-201ENST00000634557 245 ntBASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 AC136944.6-201ENST00000634818 245 ntBASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHROOM3Q8TF72 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SHROOM3Q8TF72 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SHROOM3Q8TF72 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SHROOM3Q8TF72 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.89■□□□□ 0.62
SHROOM3Q8TF72 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 MYLKP1-201ENST00000509077 1580 ntBASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 AK4P3-201ENST00000418260 669 ntBASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 KRT126P-201ENST00000549467 1181 ntBASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
SHROOM3Q8TF72 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 FAM87A-204ENST00000613235 858 ntBASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 AL358472.4-201ENST00000633140 710 ntBASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHROOM3Q8TF72 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms