Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC091607.1-201ENST00000490318 1060 ntBASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 REXO1L6P-202ENST00000619970 1078 ntBASIC14.41□□□□□ -0.1
LINC01006Q8NI28 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AL163051.1-201ENST00000569214 1512 ntBASIC14.41□□□□□ -0.1
LINC01006Q8NI28 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 AP000593.1-201ENST00000393668 712 ntBASIC14.4□□□□□ -0.1
LINC01006Q8NI28 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC01006Q8NI28 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AL032819.2-201ENST00000624543 2162 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 POM121L3P-201ENST00000419331 1163 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 KRT18P41-201ENST00000518924 1277 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AF238378.1-201ENST00000526806 358 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AC004263.2-201ENST00000617183 678 ntBASIC14.39□□□□□ -0.11
LINC01006Q8NI28 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms