Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 AC135776.1-201ENST00000319817 2481 ntBASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 AL109659.2-201ENST00000606809 1674 ntBASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
LINC01561Q8N1V8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 AL499627.1-201ENST00000569373 2188 ntBASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01561Q8N1V8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 AC004951.3-201ENST00000418645 1148 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 NIFKP9-201ENST00000419265 221 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 AC004980.1-204ENST00000429707 299 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms