Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 AC092865.5-201ENST00000545435 363 ntBASIC19.63■□□□□ 0.73
RNF135Q8IUD6 AL353801.3-201ENST00000609898 542 ntBASIC19.63■□□□□ 0.73
RNF135Q8IUD6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 AC079602.3-201ENST00000623931 403 ntBASIC19.63■□□□□ 0.73
RNF135Q8IUD6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 AC104819.1-201ENST00000504587 486 ntBASIC19.62■□□□□ 0.73
RNF135Q8IUD6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 AC138894.3-201ENST00000603787 634 ntBASIC19.62■□□□□ 0.73
RNF135Q8IUD6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.62■□□□□ 0.73
RNF135Q8IUD6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF135Q8IUD6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 IL9RP2-201ENST00000423948 1312 ntBASIC19.61■□□□□ 0.73
RNF135Q8IUD6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 FAM220CP-201ENST00000395253 831 ntBASIC19.61■□□□□ 0.73
RNF135Q8IUD6 HLA-F-220ENST00000434407 884 ntBASIC19.61■□□□□ 0.73
RNF135Q8IUD6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 ZNF815P-204ENST00000434898 1737 ntBASIC19.61■□□□□ 0.73
RNF135Q8IUD6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 SDHAP1-207ENST00000440850 2000 ntBASIC19.61■□□□□ 0.73
RNF135Q8IUD6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RNF135Q8IUD6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 MIR662-201ENST00000384847 95 ntBASIC19.6■□□□□ 0.73
RNF135Q8IUD6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF135Q8IUD6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms