Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 HOXB1-202ENST00000577092 1414 ntBASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 AC090616.6-201ENST00000582640 721 ntBASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 MIR3180-4-201ENST00000582223 153 ntBASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
VPS13BQ7Z7G8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 AL032819.2-201ENST00000624543 2162 ntBASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 SART3-203ENST00000546611 1184 ntBASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 AC116407.3-201ENST00000623905 1129 ntBASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13BQ7Z7G8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AC093484.2-201ENST00000580996 2166 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 IGHGP-201ENST00000390555 1178 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 MED15P5-201ENST00000423150 992 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms