Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 AC005332.8-201ENST00000622750 2735 ntBASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 NEK4P2-201ENST00000580004 1012 ntBASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 AL023973.1-201ENST00000624619 620 ntBASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD3Q7Z3D4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 AC112497.1-201ENST00000624824 639 ntBASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD3Q7Z3D4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 HOXB1-202ENST00000577092 1414 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 BX664615.1-201ENST00000443558 458 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 COX11P1-201ENST00000489116 835 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 AC139887.4-201ENST00000607877 719 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 AC024243.1-201ENST00000609234 778 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 AC006011.2-201ENST00000621313 1158 ntBASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD3Q7Z3D4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms