Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.26■□□□□ 0.67
LRRC38Q5VT99 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AL163051.1-201ENST00000569214 1512 ntBASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 SLC25A6P5-201ENST00000435663 894 ntBASIC19.25■□□□□ 0.67
LRRC38Q5VT99 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AP003041.3-201ENST00000527151 707 ntBASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC38Q5VT99 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 GMCL1P1-201ENST00000463439 1581 ntBASIC19.24■□□□□ 0.67
LRRC38Q5VT99 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC38Q5VT99 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 AC008764.6-201ENST00000595909 2069 ntBASIC19.23■□□□□ 0.67
LRRC38Q5VT99 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
LRRC38Q5VT99 TSPY7P-201ENST00000431358 1114 ntBASIC19.23■□□□□ 0.67
LRRC38Q5VT99 CCR12P-201ENST00000446203 998 ntBASIC19.23■□□□□ 0.67
LRRC38Q5VT99 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms